metadata
license: mit
Base model: westlake-repl/SaProt_650M_AF2
Task type: protein-level classification
The digital label means:
0: Nucleus
1: Cytoplasm
2: Extracellular
3: Mitochondrion
4: Cell.membrane
5: Endoplasmic.reticulum
6: Plastid
7: Golgi.apparatus
8: Lysosome/Vacuole
9: Peroxisome
Dataset: SaProtHub/Dataset-Subcellular_Localization-DeepLoc
Model input type: SA(Structure-aware) sequence
Performance (on test set): 85.75% Accuracy
LoRA config:
- r: 16
- lora_dropout: 0
- lora_alpha: 32
- target_modules: ["query", "key", "value", "intermediate.dense", "output.dense"]
- modules_to_save: ["classifier"]
Training config:
- optimizer:
- class: AdamW
- betas: (0.9, 0.98)
- weight_decay: 0.01
- learning rate: 5e-4
- epoch: 100
- batch size: 64
- precision: 16-mixed